Package | us.nlm.vsac |
Type | ValueSet |
Id | Id |
FHIR Version | R4 |
Source | http://fhir.org/packages/us.nlm.vsac/https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.319/expansion |
Url | http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.319 |
Version | 20240122 |
Status | active |
Date | 2024-01-22T01:09:37-05:00 |
Name | FungiTestsByCultureAndIdentificationMethod |
Title | Fungi (Tests by Culture and Identification Method) |
Experimental | False |
Realm | us |
Authority | hl7 |
Purpose | (Clinical Focus: This set of values contains codes for laboratory test names associated with fungi identified by an culture and identification method),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: VSAC query: fungus or yeast identified; - LOINC search: LOINC search: "(fungus or yeast) identified (isolate or culture or inoculation) PRID -environmental -implant -device"),(Exclusion Criteria: non-clinical methods: implant, environmental, device Scale=Ordinal; Scale=Quantitative;) |
No resources found
CodeSystem | |
http://loinc.org ![]() | LOINC Code System |
http://loinc.org ![]() | LOINC codes used in this IG |
http://loinc.org ![]() | Logical Observation Identifiers, Names and Codes (LOINC) |
{
"resourceType" : "ValueSet",
"id" : "2.16.840.1.113762.1.4.1146.319",
"meta" : {
"versionId" : "41",
"lastUpdated" : "2024-01-22T01:09:37.000-05:00",
"profile" : [
"http://hl7.org/fhir/StructureDefinition/shareablevalueset",
"http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm",
"http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/publishable-valueset-cqfm"
]
},
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/valueset-author",
"valueContactDetail" : {
"name" : "CSTE Author"
}
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
"valueString" : "G_Common"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
"valueDate" : "2025-01-13"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
"valueDate" : "2024-01-22"
}
],
"url" : "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.319",
"identifier" : [
{
"system" : "urn:ietf:rfc:3986",
"value" : "urn:oid:2.16.840.1.113762.1.4.1146.319"
}
],
"version" : "20240122",
"name" : "FungiTestsByCultureAndIdentificationMethod",
"title" : "Fungi (Tests by Culture and Identification Method)",
"status" : "active",
"date" : "2024-01-22T01:09:37-05:00",
"publisher" : "CSTE Steward",
"jurisdiction" : [
{
"coding" : [
{
"system" : "urn:iso:std:iso:3166",
"code" : "US"
}
]
}
],
"purpose" : "(Clinical Focus: This set of values contains codes for laboratory test names associated with fungi identified by an culture and identification method),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: VSAC query: fungus or yeast identified; \n\n- LOINC search: LOINC search: \"(fungus or yeast) identified (isolate or culture or inoculation) PRID -environmental -implant -device\"),(Exclusion Criteria: non-clinical methods: implant, environmental, device\nScale=Ordinal;\nScale=Quantitative;)",
"compose" : {
"include" : [
{
"system" : "http://loinc.org",
"concept" : [
{
"code" : "15378-3",
"display" : "Fungus identified in Isolate by Culture"
},
{
"code" : "17947-3",
"display" : "Fungus # 2 identified in Specimen by Culture"
},
{
"code" : "17948-1",
"display" : "Fungus # 3 identified in Specimen by Culture"
},
{
"code" : "17949-9",
"display" : "Fungus # 4 identified in Specimen by Culture"
},
{
"code" : "18482-0",
"display" : "Yeast [Presence] in Specimen by Organism specific culture"
},
{
"code" : "24009-3",
"display" : "Fungus identified in Bronchial specimen by Culture"
},
{
"code" : "27414-2",
"display" : "Fungus identified in Stool by Culture"
},
{
"code" : "40435-0",
"display" : "Fungus identified in Urine by Culture"
},
{
"code" : "41026-6",
"display" : "Fungus identified in Genital specimen by Culture"
},
{
"code" : "42804-5",
"display" : "Fungus identified in Isolate"
},
{
"code" : "44840-7",
"display" : "Fungus # 5 identified in Specimen by Culture"
},
{
"code" : "47291-0",
"display" : "Fungus # 6 identified in Specimen by Culture"
},
{
"code" : "47292-8",
"display" : "Fungus # 7 identified in Specimen by Culture"
},
{
"code" : "50766-5",
"display" : "Fungus # 8 identified in Specimen by Culture"
},
{
"code" : "51723-5",
"display" : "Fungus [Presence] in Specimen by Organism specific culture"
},
{
"code" : "53571-6",
"display" : "Yeast identified in Genital specimen by Organism specific culture"
},
{
"code" : "568-6",
"display" : "Fungus identified in Aspirate by Culture"
},
{
"code" : "569-4",
"display" : "Fungus identified in Cerebral spinal fluid by Culture"
},
{
"code" : "570-2",
"display" : "Fungus identified in Body fluid by Culture"
},
{
"code" : "571-0",
"display" : "Fungus identified in Hair by Culture"
},
{
"code" : "572-8",
"display" : "Fungus identified in Bone marrow by Culture"
},
{
"code" : "573-6",
"display" : "Fungus identified in Nail by Culture"
},
{
"code" : "574-4",
"display" : "Fungus identified in Peritoneal fluid by Culture"
},
{
"code" : "575-1",
"display" : "Fungus identified in Skin by Culture"
},
{
"code" : "576-9",
"display" : "Fungus identified in Synovial fluid by Culture"
},
{
"code" : "577-7",
"display" : "Fungus identified in Sputum by Culture"
},
{
"code" : "578-5",
"display" : "Fungus identified in Tissue by Culture"
},
{
"code" : "579-3",
"display" : "Fungus identified in Wound by Culture"
},
{
"code" : "580-1",
"display" : "Fungus identified in Specimen by Culture"
},
{
"code" : "601-5",
"display" : "Fungus identified in Blood by Culture"
},
{
"code" : "613-0",
"display" : "Fungal strain [Type] in Isolate by Fungus subtyping"
},
{
"code" : "6409-7",
"display" : "Fungus identified in Sputum tracheal aspirate by Culture"
},
{
"code" : "76073-6",
"display" : "Fungus identified in Nose by Culture"
},
{
"code" : "76692-3",
"display" : "Fungus identified [#/volume] in Mouth by Culture"
},
{
"code" : "87977-5",
"display" : "Fungus identified in Pericardial fluid by Culture"
},
{
"code" : "87978-3",
"display" : "Fungus identified in Peritoneal dialysis fluid by Culture"
},
{
"code" : "87979-1",
"display" : "Fungus identified in Pleural fluid by Culture"
},
{
"code" : "87980-9",
"display" : "Fungus identified in Sinus by Culture"
},
{
"code" : "87981-7",
"display" : "Fungus identified in Burn by Culture"
},
{
"code" : "88143-3",
"display" : "Fungus identified in Cornea or Conjunctiva by Culture"
},
{
"code" : "88686-1",
"display" : "Fungus identified in Bronchoalveolar lavage by Culture"
},
{
"code" : "88687-9",
"display" : "Fungus identified in Mouth by Culture"
},
{
"code" : "89656-3",
"display" : "Fungus identified in Lower respiratory specimen by Culture"
},
{
"code" : "90078-7",
"display" : "Yeast identified in Isolate by Organism specific culture"
},
{
"code" : "91779-9",
"display" : "Yeast identified in Upper respiratory specimen by Organism specific culture"
},
{
"code" : "91812-8",
"display" : "Fungus identified in Upper respiratory specimen by Culture"
}
]
}
]
},
"expansion" : {
"identifier" : "urn:uuid:829ad197-a520-4fb2-b2d8-0c2f14815f87",
"timestamp" : "2025-05-11T04:26:42-04:00",
"total" : 46,
"contains" : [
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "15378-3",
"display" : "Fungus identified in Isolate by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "17947-3",
"display" : "Fungus # 2 identified in Specimen by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "17948-1",
"display" : "Fungus # 3 identified in Specimen by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "17949-9",
"display" : "Fungus # 4 identified in Specimen by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "18482-0",
"display" : "Yeast [Presence] in Specimen by Organism specific culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "24009-3",
"display" : "Fungus identified in Bronchial specimen by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "27414-2",
"display" : "Fungus identified in Stool by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "40435-0",
"display" : "Fungus identified in Urine by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "41026-6",
"display" : "Fungus identified in Genital specimen by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "42804-5",
"display" : "Fungus identified in Isolate"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "44840-7",
"display" : "Fungus # 5 identified in Specimen by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "47291-0",
"display" : "Fungus # 6 identified in Specimen by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "47292-8",
"display" : "Fungus # 7 identified in Specimen by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "50766-5",
"display" : "Fungus # 8 identified in Specimen by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "51723-5",
"display" : "Fungus [Presence] in Specimen by Organism specific culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "53571-6",
"display" : "Yeast identified in Genital specimen by Organism specific culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "568-6",
"display" : "Fungus identified in Aspirate by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "569-4",
"display" : "Fungus identified in Cerebral spinal fluid by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "570-2",
"display" : "Fungus identified in Body fluid by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "571-0",
"display" : "Fungus identified in Hair by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "572-8",
"display" : "Fungus identified in Bone marrow by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "573-6",
"display" : "Fungus identified in Nail by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "574-4",
"display" : "Fungus identified in Peritoneal fluid by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "575-1",
"display" : "Fungus identified in Skin by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "576-9",
"display" : "Fungus identified in Synovial fluid by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "577-7",
"display" : "Fungus identified in Sputum by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "578-5",
"display" : "Fungus identified in Tissue by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "579-3",
"display" : "Fungus identified in Wound by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "580-1",
"display" : "Fungus identified in Specimen by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "601-5",
"display" : "Fungus identified in Blood by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "613-0",
"display" : "Fungal strain [Type] in Isolate by Fungus subtyping"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "6409-7",
"display" : "Fungus identified in Sputum tracheal aspirate by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "76073-6",
"display" : "Fungus identified in Nose by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "76692-3",
"display" : "Fungus identified [#/volume] in Mouth by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "87977-5",
"display" : "Fungus identified in Pericardial fluid by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "87978-3",
"display" : "Fungus identified in Peritoneal dialysis fluid by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "87979-1",
"display" : "Fungus identified in Pleural fluid by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "87980-9",
"display" : "Fungus identified in Sinus by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "87981-7",
"display" : "Fungus identified in Burn by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "88143-3",
"display" : "Fungus identified in Cornea or Conjunctiva by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "88686-1",
"display" : "Fungus identified in Bronchoalveolar lavage by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "88687-9",
"display" : "Fungus identified in Mouth by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "89656-3",
"display" : "Fungus identified in Lower respiratory specimen by Culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "90078-7",
"display" : "Yeast identified in Isolate by Organism specific culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "91779-9",
"display" : "Yeast identified in Upper respiratory specimen by Organism specific culture"
},
{
"system" : "http://loinc.org",
"version" : "2.80",
"code" : "91812-8",
"display" : "Fungus identified in Upper respiratory specimen by Culture"
}
]
},
"text" : {
}
}
XIG built as of ??metadata-date??. Found ??metadata-resources?? resources in ??metadata-packages?? packages.